The distributed annotation system for integration of biological data

Andreas Prlić; Ewan Birney; Tony Cox; Thomas A. Down; Rob Finn; Stefan Gräf; David Jackson; Andreas Kähäri; Eugene Kulesha; Roger Pettett; James Smith; Jim Stalker; Tim J.P. Hubbard

doi:10.1007/11799511_17

The distributed annotation system for integration of biological data

Andreas Prlić^*, Ewan Birney, Tony Cox, Thomas A. Down, Rob Finn, Stefan Gräf, David Jackson, Andreas Kähäri, Eugene Kulesha, Roger Pettett, James Smith, Jim Stalker, Tim J.P. Hubbard

^*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

6 Citations (Scopus)

Abstract

The Distributed Annotation System (DAS) is a protocol for sharing of biological data which allows for dynamical data integration. It has become widely used in both the genome and protein bioinformatics communities. Here we provide an overview of the available DAS infrastructure and present our latest developments, including a registration server that facilitates service discovery by DAS clients while automatically monitoring service availability. Currently there are 108 registered DAS servers, provided by 24 institutions in 10 countries.

Original language	English
Title of host publication	Data Integration in the Life Sciences - Third International Workshop, DILS 2006, Proceedings
Publisher	Springer Verlag
Pages	195-203
Number of pages	9
ISBN (Print)	3540365931, 9783540365938
DOIs	https://doi.org/10.1007/11799511_17
Publication status	Published - 2006
Externally published	Yes
Event	3rd International Workshop on Data Integration in the Life Sciences, DILS 2006 - Hinxton, United Kingdom Duration: 20 Jul 2006 → 22 Jul 2006

Publication series

Name	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume	4075 LNBI
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Conference

Conference	3rd International Workshop on Data Integration in the Life Sciences, DILS 2006
Country/Territory	United Kingdom
City	Hinxton
Period	20/07/06 → 22/07/06

Access to Document

10.1007/11799511_17

Cite this

Prlić, A., Birney, E., Cox, T., Down, T. A., Finn, R., Gräf, S., Jackson, D., Kähäri, A., Kulesha, E., Pettett, R., Smith, J., Stalker, J., & Hubbard, T. J. P. (2006). The distributed annotation system for integration of biological data. In Data Integration in the Life Sciences - Third International Workshop, DILS 2006, Proceedings (pp. 195-203). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 4075 LNBI). Springer Verlag. https://doi.org/10.1007/11799511_17

Prlić, Andreas ; Birney, Ewan ; Cox, Tony et al. / The distributed annotation system for integration of biological data. Data Integration in the Life Sciences - Third International Workshop, DILS 2006, Proceedings. Springer Verlag, 2006. pp. 195-203 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

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title = "The distributed annotation system for integration of biological data",

abstract = "The Distributed Annotation System (DAS) is a protocol for sharing of biological data which allows for dynamical data integration. It has become widely used in both the genome and protein bioinformatics communities. Here we provide an overview of the available DAS infrastructure and present our latest developments, including a registration server that facilitates service discovery by DAS clients while automatically monitoring service availability. Currently there are 108 registered DAS servers, provided by 24 institutions in 10 countries.",

author = "Andreas Prli{\'c} and Ewan Birney and Tony Cox and Down, {Thomas A.} and Rob Finn and Stefan Gr{\"a}f and David Jackson and Andreas K{\"a}h{\"a}ri and Eugene Kulesha and Roger Pettett and James Smith and Jim Stalker and Hubbard, {Tim J.P.}",

year = "2006",

doi = "10.1007/11799511_17",

language = "English",

isbn = "3540365931",

series = "Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)",

publisher = "Springer Verlag",

pages = "195--203",

booktitle = "Data Integration in the Life Sciences - Third International Workshop, DILS 2006, Proceedings",

note = "3rd International Workshop on Data Integration in the Life Sciences, DILS 2006 ; Conference date: 20-07-2006 Through 22-07-2006",

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Prlić, A, Birney, E, Cox, T, Down, TA, Finn, R, Gräf, S, Jackson, D, Kähäri, A, Kulesha, E, Pettett, R, Smith, J, Stalker, J & Hubbard, TJP 2006, The distributed annotation system for integration of biological data. in Data Integration in the Life Sciences - Third International Workshop, DILS 2006, Proceedings. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 4075 LNBI, Springer Verlag, pp. 195-203, 3rd International Workshop on Data Integration in the Life Sciences, DILS 2006, Hinxton, United Kingdom, 20/07/06. https://doi.org/10.1007/11799511_17

The distributed annotation system for integration of biological data. / Prlić, Andreas; Birney, Ewan; Cox, Tony et al.
Data Integration in the Life Sciences - Third International Workshop, DILS 2006, Proceedings. Springer Verlag, 2006. p. 195-203 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 4075 LNBI).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

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AU - Birney, Ewan

AU - Cox, Tony

AU - Down, Thomas A.

AU - Finn, Rob

AU - Gräf, Stefan

AU - Jackson, David

AU - Kähäri, Andreas

AU - Kulesha, Eugene

AU - Pettett, Roger

AU - Smith, James

AU - Stalker, Jim

AU - Hubbard, Tim J.P.

PY - 2006

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AB - The Distributed Annotation System (DAS) is a protocol for sharing of biological data which allows for dynamical data integration. It has become widely used in both the genome and protein bioinformatics communities. Here we provide an overview of the available DAS infrastructure and present our latest developments, including a registration server that facilitates service discovery by DAS clients while automatically monitoring service availability. Currently there are 108 registered DAS servers, provided by 24 institutions in 10 countries.

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AN - SCOPUS:33746731060

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SN - 9783540365938

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BT - Data Integration in the Life Sciences - Third International Workshop, DILS 2006, Proceedings

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ER -

Prlić A, Birney E, Cox T, Down TA, Finn R, Gräf S et al. The distributed annotation system for integration of biological data. In Data Integration in the Life Sciences - Third International Workshop, DILS 2006, Proceedings. Springer Verlag. 2006. p. 195-203. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). doi: 10.1007/11799511_17

The distributed annotation system for integration of biological data

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