Closed genome sequence obtained using hybrid nanopore/ illumina assembly of a bacillus anthracis isolate from an animal-skin-drum-associated anthrax case in the United Kingdom

Steven Pullan; Rory W. Miles; Kuiama Lewandowski; Richard Vipond

doi:10.1128/MRA.00802-18

Closed genome sequence obtained using hybrid nanopore/ illumina assembly of a bacillus anthracis isolate from an animal-skin-drum-associated anthrax case in the United Kingdom

Steven Pullan^*, Rory W. Miles, Kuiama Lewandowski, Richard Vipond

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

Abstract

Hybrid de novo assembly of Illumina/Nanopore reads produced a complete closed genome sequence of the chromosome and two virulence plasmids of a Bacillus anthracis isolate from a fatal anthrax case in the United Kingdom linked to imported animal skins/drums; this provides a high-quality representative sequence for this lineage.

Original language	English
Article number	e0080218
Journal	Microbiology Resource Announcements
Volume	7
Issue number	13
DOIs	https://doi.org/10.1128/MRA.00802-18
Publication status	Published - 4 Oct 2018

Bibliographical note

Funding Information:
We thank all those involved in sample collection, Cath Arnold, and the Public Health England Genomic Services and Development Unit sequencing team. The views expressed here are those of the authors and not necessarily those of Public Health England or the Department of Health.

Publisher Copyright:
© Crown copyright 2018. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

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10.1128/MRA.00802-18

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abstract = "Hybrid de novo assembly of Illumina/Nanopore reads produced a complete closed genome sequence of the chromosome and two virulence plasmids of a Bacillus anthracis isolate from a fatal anthrax case in the United Kingdom linked to imported animal skins/drums; this provides a high-quality representative sequence for this lineage.",

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Closed genome sequence obtained using hybrid nanopore/ illumina assembly of a bacillus anthracis isolate from an animal-skin-drum-associated anthrax case in the United Kingdom. / Pullan, Steven; Miles, Rory W.; Lewandowski, Kuiama et al.
In: Microbiology Resource Announcements, Vol. 7, No. 13, e0080218, 04.10.2018.

Research output: Contribution to journal › Article › peer-review

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AU - Vipond, Richard

N1 - Funding Information: We thank all those involved in sample collection, Cath Arnold, and the Public Health England Genomic Services and Development Unit sequencing team. The views expressed here are those of the authors and not necessarily those of Public Health England or the Department of Health. Publisher Copyright: © Crown copyright 2018. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

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AB - Hybrid de novo assembly of Illumina/Nanopore reads produced a complete closed genome sequence of the chromosome and two virulence plasmids of a Bacillus anthracis isolate from a fatal anthrax case in the United Kingdom linked to imported animal skins/drums; this provides a high-quality representative sequence for this lineage.

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Closed genome sequence obtained using hybrid nanopore/ illumina assembly of a bacillus anthracis isolate from an animal-skin-drum-associated anthrax case in the United Kingdom

Abstract

Bibliographical note

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