TY - JOUR
T1 - A pathway-based network analysis of hypertension-related genes
AU - Wang, Huan
AU - Hu, Jing Bo
AU - Xu, Chuan Yun
AU - Zhang, De Hai
AU - Yan, Qian
AU - Xu, Ming
AU - Cao, Ke Fei
AU - Zhang, Xu Sheng
N1 - Publisher Copyright:
© 2015 Elsevier B.V.
PY - 2016/2/15
Y1 - 2016/2/15
N2 - Complex network approach has become an effective way to describe interrelationships among large amounts of biological data, which is especially useful in finding core functions and global behavior of biological systems. Hypertension is a complex disease caused by many reasons including genetic, physiological, psychological and even social factors. In this paper, based on the information of biological pathways, we construct a network model of hypertension-related genes of the salt-sensitive rat to explore the interrelationship between genes. Statistical and topological characteristics show that the network has the small-world but not scale-free property, and exhibits a modular structure, revealing compact and complex connections among these genes. By the threshold of integrated centrality larger than 0.71, seven key hub genes are found: Jun, Rps6kb1, Cycs, Creb312, Cdk4, Actg1 and RT1-Da. These genes should play an important role in hypertension, suggesting that the treatment of hypertension should focus on the combination of drugs on multiple genes.
AB - Complex network approach has become an effective way to describe interrelationships among large amounts of biological data, which is especially useful in finding core functions and global behavior of biological systems. Hypertension is a complex disease caused by many reasons including genetic, physiological, psychological and even social factors. In this paper, based on the information of biological pathways, we construct a network model of hypertension-related genes of the salt-sensitive rat to explore the interrelationship between genes. Statistical and topological characteristics show that the network has the small-world but not scale-free property, and exhibits a modular structure, revealing compact and complex connections among these genes. By the threshold of integrated centrality larger than 0.71, seven key hub genes are found: Jun, Rps6kb1, Cycs, Creb312, Cdk4, Actg1 and RT1-Da. These genes should play an important role in hypertension, suggesting that the treatment of hypertension should focus on the combination of drugs on multiple genes.
KW - Complex network
KW - Hub gene
KW - Hypertension
KW - Modular structure
KW - Pathway
UR - http://www.scopus.com/inward/record.url?scp=84946593494&partnerID=8YFLogxK
U2 - 10.1016/j.physa.2015.10.048
DO - 10.1016/j.physa.2015.10.048
M3 - Article
AN - SCOPUS:84946593494
SN - 0378-4371
VL - 444
SP - 928
EP - 939
JO - Physica A: Statistical Mechanics and its Applications
JF - Physica A: Statistical Mechanics and its Applications
ER -