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2023
A novel candidate hepatitis C virus genotype 4 subtype identified by next generation sequencing full-genome characterization in a patient from Saudi Arabia
Di Stefano, M., Ismail, M. H., Leitner, T., Faleo, G., Alwazzeh, M. J., Mbisa, J. L., Fiore, J. R. & Santantonio, T. A., 2023, In: Frontiers in Microbiology. 14, 1285367.Research output: Contribution to journal › Article › peer-review
Open Access -
Antibiotic review kit for hospitals (ARK-Hospital): a stepped-wedge cluster-randomised controlled trial
Llewelyn, M. J., Budgell, E. P., Laskawiec-Szkonter, M., Cross, E. L. A., Alexander, R., Bond, S., Coles, P., Conlon-Bingham, G., Dymond, S., Evans, M., Fok, R., Frost, K. J., Garcia-Arias, V., Glass, S., Gormley, C., Gray, K., Hamson, C., Harvey, D., Hills, T., Iyer, S., & 38 others , Feb 2023, In: The Lancet Infectious Diseases. 23, 2, p. 207-221 15 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Citations (Scopus) -
Antibody and B-cell Immune Responses Against Bordetella Pertussis Following Infection and Immunization
Abu-Raya, B., Esser, M. J., Nakabembe, E., Reiné, J., Amaral, K., Diks, A. M., Imede, E., Way, S. S., Harandi, A. M., Gorringe, A., Le Doare, K., Halperin, S. A., Berkowska, M. A. & Sadarangani, M., 15 Dec 2023, In: Journal of Molecular Biology. 435, 24, 168344.Research output: Contribution to journal › Review article › peer-review
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Antibody correlates of protection against Delta infection after vaccination: A nested case-control within the UK-based SIREN study
the SIREN Study Group & Crick COVID Immunity Pipeline, Nov 2023, In: Journal of Infection. 87, 5, p. 420-427 8 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Antibody Persistence After Primary SARS-CoV-2 Infection and Protection Against Future Variants Including Omicron in Adolescents: National, Prospective Cohort Study
Aiano, F., Ireland, G., Baawuah, F., Beckmann, J., Okike, I. O., Ahmad, S., Garstang, J., Brent, A. J., Brent, B., Borrow, R., Linley, E., Ho, S., Carr, C., Zambon, M., Poh, J., Warrener, L., Amirthalingam, G., Brown, K. E., Ramsay, M. E., Hoschler, K., & 1 others , 1 Jun 2023, In: Pediatric Infectious Disease Journal. 42, 6, p. 496-502 7 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Antifungal susceptibility profiles for fungal isolates from corneas and contact lenses in the United Kingdom
Tuft, S., Stone, N. R. H., Burton, M. J., Johnson, E. M. & Borman, A. M., 2023, (Accepted/In press) In: Eye (Basingstoke).Research output: Contribution to journal › Article › peer-review
Open Access -
Anti-Hepatitis C (HCV) test positivity and new HCV diagnoses among women tested in antenatal services in England between 2015-2019
Hibbert, M., Simmons, R., Mandal, S., Sabin, C. A. & Desai, M., Dec 2023, In: Midwifery. 127, 103863.Research output: Contribution to journal › Article › peer-review
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APOBEC3 deaminase editing in mpox virus as evidence for sustained human transmission since at least 2016
O'Toole, Á., Neher, R. A., Ndodo, N., Borges, V., Gannon, B., Gomes, J. P., Groves, N., King, D. J., Maloney, D., Lemey, P., Lewandowski, K., Loman, N., Myers, R., Omah, I. F., Suchard, M. A., Worobey, M., Chand, M., Ihekweazu, C., Ulaeto, D., Adetifa, I., & 1 others , 3 Nov 2023, In: Science. 382, 6670, p. 595-600 6 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Appeal from the European reference laboratory network for tuberculosis for improving the diagnosis of infections caused by non-tuberculous mycobacteria
Tagliani, E., Kohl, T. A., Ghodousi, A., Groenheit, R., Holicka, Y., Niemann, S., Maurer, F. P., Cirillo, D. M. & Cambau, E., 2023, (Accepted/In press) In: Clinical Microbiology and Infection.Research output: Contribution to journal › Comment/debate
1 Citation (Scopus) -
Apples and oranges? Making sense of global keratinocyte cancer data
Venables, Z. C., Feb 2023, In: British Journal of Dermatology. 188, 2, p. 166-167 2 p.Research output: Contribution to journal › Article › peer-review
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Application of a new multi-locus variable number tandem repeat analysis (MLVA) scheme for the seasonal investigation of Cryptosporidium parvum cases in Wales and the northwest of England, spring 2022
Risby, H., Robinson, G., Chandra, N., King, G., Vivancos, R., Smith, R., Thomas, D., Fox, A., McCarthy, N. & Chalmers, R. M., Jan 2023, In: Current Research in Parasitology and Vector-Borne Diseases. 4, 100151.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Application of human biomonitoring data to support policy development, raise awareness and environmental public health protection among countries within the HBM4EU project
Contributors, Jun 2023, In: International Journal of Hygiene and Environmental Health. 251, 114170.Research output: Contribution to journal › Review article › peer-review
2 Citations (Scopus) -
Application of prophage sequence analysis to investigate a disease outbreak involving Salmonella Adjame, a rare serovar and implications for the population structure
Gao, R., Duceppe, M. O., Chattaway, M. A., Goodridge, L. & Ogunremi, D., 2023, In: Frontiers in Microbiology. 14, 1086198.Research output: Contribution to journal › Article › peer-review
Open Access -
Applications to medical and surgical specialist training in the UK National Health Service, 2021-2022: A cross-sectional observational study to characterise the diversity of successful applicants
Aggarwal, D., Roy-Chowdhury, M., Xiang, N. & Peacock, S. J., 19 Apr 2023, In: BMJ Open. 13, 4, e069846.Research output: Contribution to journal › Article › peer-review
Open Access -
Applying genomics in regulatory toxicology: a report of the ECETOC workshop on omics threshold on non-adversity
Gant, T. W., Auerbach, S. S., Von Bergen, M., Bouhifd, M., Botham, P. A., Caiment, F., Currie, R. A., Harrill, J., Johnson, K., Li, D., Rouquie, D., van Ravenzwaay, B., Sistare, F., Tralau, T., Viant, M. R., van de Laan, J. W. & Yauk, C., Aug 2023, In: Archives of Toxicology. 97, 8, p. 2291-2302 12 p.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Applying machine-learning to rapidly analyze large qualitative text datasets to inform the COVID-19 pandemic response: comparing human and machine-assisted topic analysis techniques
Towler, L., Bondaronek, P., Papakonstantinou, T., Amlôt, R., Chadborn, T., Ainsworth, B. & Yardley, L., 2023, In: Frontiers in Public Health. 11, 1268223.Research output: Contribution to journal › Article › peer-review
Open Access -
Appropriateness of acute-care antibiotic prescriptions for community-acquired infections and surgical antibiotic prophylaxis in England: analysis of 2016 national point prevalence survey data
Higgins, H., Freeman, R., Doble, A., Hood, G., Islam, J., Gerver, S., Henderson, K. L., Demirjian, A., Hopkins, S. & Ashiru-Oredope, D., Dec 2023, In: Journal of Hospital Infection. 142, p. 115-129 15 p.Research output: Contribution to journal › Article › peer-review
Open Access -
A protracted outbreak of difficult-to-treat resistant Pseudomonas aeruginosa in a haematology unit: a matched case–control study demonstrating increased risk with use of fluoroquinolone
Rice, W., Martin, J., Hodgkin, M., Carter, J., Barrasa, A., Sweeting, K., Johnson, R., Best, E., Nahl, J., Denton, M. & Hughes, G. J., Feb 2023, In: Journal of Hospital Infection. 132, p. 52-61 10 p.Research output: Contribution to journal › Article › peer-review
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A Qualitative Evaluation of a Health Access Card for Refugees and Asylum Seekers in a City in Northern England
Moffat, M., Nicholson, S., Darke, J., Brown, M., Minto, S., Sowden, S. & Rankin, J., Jan 2023, In: International Journal of Environmental Research and Public Health. 20, 2, 1429.Research output: Contribution to journal › Article › peer-review
Open Access -
A qualitative interview study applying the COM-B model to explore how hospital-based trainers implement antimicrobial stewardship education and training in UK hospital-based care
Turner, R., Hart, J., Ashiru-Oredope, D., Atkins, L., Eades, C., Felton, T., Howlett, E., Rice, S., Shallcross, L., Lorencatto, F. & Byrne-Davis, L., Dec 2023, In: BMC Health Services Research. 23, 1, 770.Research output: Contribution to journal › Article › peer-review
Open Access -
A qualitative investigation of perceptions towards antibiotics by members of the public after choosing to pledge as an Antibiotic Guardian
Flintham, L., Ashiru-Oredope, D., Charlesworth, J., Harrison, R. & Dalgarno, E., Feb 2023, In: Health Expectations. 26, 1, p. 440-451 12 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile7 Downloads (Pure) -
A Qualitative Study to Explore the Employment Experiences and Perspectives of Women Living with Multiple Sclerosis in the UK
Railton, C., Jefferson, L. & Taylor, J., Sept 2023, In: Employee Responsibilities and Rights Journal. 35, 3, p. 305-330 26 p.Research output: Contribution to journal › Article › peer-review
Open Access -
A quasi-one-dimensional model for ion-aerosol interactions and aerosol charge state downwind of corona-producing alternating current (AC) HVPL under stable atmospheric conditions
Wright, M. D., Matthews, J. C. & Shallcross, D. E., 15 Aug 2023, In: Environmental Research. 231, 115908.Research output: Contribution to journal › Article › peer-review
Open Access -
A Randomized Trial Assessing the Immunogenicity and Reactogenicity of Two Hexavalent Infant Vaccines Concomitantly Administered with Group B Meningococcal Vaccine
Rajan, M., Marchevsky, N., Sinclair, G., O'Brien, K., Jefferies, K., Owino, N., Hallis, B., Goldblatt, D., Matheson, M., Cuthbertson, H., Aley, P., Liu, X. & Snape, M. D., 1 Jan 2023, In: Pediatric Infectious Disease Journal. 42, 1, p. 66-73 8 p.Research output: Contribution to journal › Article › peer-review
Open Access -
A rare case of Salmonella Paratyphi C osteomyelitis: A genetic analysis and review of Salmonella osteomyelitis in England
Hurt, W., Stephenson, J., Hutchinson, J., Godbole, G. & Chattaway, M. A., Mar 2023, In: Diagnostic Microbiology and Infectious Disease. 105, 3, 115877.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)33 Downloads (Pure) -
A Re-emergence of Subacute Sclerosing Panencephalitis in the United Kingdom
Campbell, H., Lopez Bernal, J., Bukasa, A., Andrews, N., Baker, E., Maunder, P., Winstone, A. M., Ramsay, M., Verity, C. & Brown, K., 1 Jan 2023, In: Pediatric Infectious Disease Journal. 42, 1, p. 82-84 3 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Citations (Scopus) -
A review of the DTaP-IPV-HB-PRP-T Hexavalent vaccine in pediatric patients
Dakin, A., Borrow, R. & Arkwright, P. D., 2023, In: Expert Review of Vaccines. 22, 1, p. 104-117 14 p.Research output: Contribution to journal › Article › peer-review
Open Access3 Citations (Scopus) -
A SARS-CoV-2 outbreak associated with five air force bases and a nightclub following the lifting of COVID-19-related social restrictions, United Kingdom, July-to-September 2021
Taylor, M. J., Kumbang, J., Bamford, K., Mohammed Jazuli Ismail, H., Huntley, P., Liddle, N., Errington, J. & Mair-Jenkins, J., 3 Feb 2023, In: Epidemiology and Infection. 151, e26.Research output: Contribution to journal › Article › peer-review
Open Access -
A SARS-CoV-2 outbreak in a plastics manufacturing plant
Graham, A., Raja, A. I., van Veldhoven, K., Nicholls, G., Simpson, A., Atkinson, B., Nicholls, I., Higgins, H., Cooke, J., Bennett, A., Morgan, D., Keen, C., Fletcher, T., Pearce, N., Atchison, C., Brickley, E. B. & Chen, Y., Dec 2023, In: BMC Public Health. 23, 1, 1077.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
A scoping review of media campaign strategies used to reach populations living with or at high risk for Hepatitis C in high income countries to inform future national campaigns in the United Kingdom
Etoori, D., Desai, M., Mandal, S., Rosenberg, W. & Sabin, C. A., Dec 2023, In: BMC Infectious Diseases. 23, 1, 629.Research output: Contribution to journal › Article › peer-review
Open Access -
A spatio-temporal framework for modelling wastewater concentration during the COVID-19 pandemic
Li, G., Denise, H., Diggle, P., Grimsley, J., Holmes, C., James, D., Jersakova, R., Mole, C., Nicholson, G., Smith, C. R., Richardson, S., Rowe, W., Rowlingson, B., Torabi, F., Wade, M. J. & Blangiardo, M., Feb 2023, In: Environment International. 172, 107765.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
A spitting image: molecular diagnostics applied to saliva enhance detection of Streptococcus pneumoniae and pneumococcal serotype carriage
Miellet, W. R., van Veldhuizen, J., Litt, D., Mariman, R., Wijmenga-Monsuur, A. J., Nieuwenhuijsen, T., Christopher, J., Thombre, R., Eletu, S., Bosch, T., Rots, N. Y., van Houten, M. A., Miller, E., Fry, N. K., Sanders, E. A. M. & Trzciński, K., 2023, In: Frontiers in Microbiology. 14, 1156695.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Assessing COVID-19 vaccine effectiveness against Omicron subvariants: Report from a meeting of the World Health Organization
Feikin, D. R., Higdon, M. M., Andrews, N., Collie, S., Deloria Knoll, M., Kwong, J. C., Link-Gelles, R., Pilishvili, T. & Patel, M. K., 31 Mar 2023, In: Vaccine. 41, 14, p. 2329-2338 10 p.Research output: Contribution to journal › Article › peer-review
Open Access5 Citations (Scopus) -
Assessing the effect of a canine surgical-neutering educational programme on the knowledge and confidence of Indian veterinary participants
Rayner, E. L., Airikkala-Otter, I., Mellanby, R. J., Gibson, A. D., Susheelan, A., Gamble, L. & Mazeri, S., 2023, In: Frontiers in Veterinary Science. 10, 942890.Research output: Contribution to journal › Article › peer-review
Open Access -
Assessing variation in neonatal sepsis screening across England
Moore, H. L., Battersby, C., Piyasena, C., Demirjian, A. & Lamagni, T., 1 Jul 2023, In: Archives of Disease in Childhood: Fetal and Neonatal Edition. 108, 4, p. 430-431 2 p.Research output: Contribution to journal › Letter › peer-review
2 Citations (Scopus) -
Assessment of the Biological Impact of SARS-CoV-2 Genetic Variation Using an Authentic Virus Neutralisation Assay with Convalescent Plasma, Vaccinee Sera, and Standard Reagents
Coombes, N. S., Bewley, K. R., Le Duff, Y., Hurley, M., Smith, L. J., Weldon, T. M., Osman, K., Pullan, S., Berry, N., Hallis, B., Charlton, S., Hall, Y. & Funnell, S. G. P., Mar 2023, In: Viruses. 15, 3, 633.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Association between socioeconomic deprivation and incidence of infectious intestinal disease by pathogen and linked transmission route: An ecological analysis in the UK
Buczkowska, M., Butt, S., Jenkins, C., Hungerford, D., Hawker, J., Verlander, N. Q., O'Connell, A. M. & Byrne, L., 14 Jun 2023, In: Epidemiology and Infection. 151, e109.Research output: Contribution to journal › Article › peer-review
Open Access -
Association of Country Income Level With the Characteristics and Outcomes of Critically Ill Patients Hospitalized With Acute Kidney Injury and COVID-19
ISARIC Characterization Group, Aug 2023, In: Kidney International Reports. 8, 8, p. 1514-1530 17 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Association of diabetes, smoking, and alcohol use with subclinical-to-symptomatic spectrum of tuberculosis in 16 countries: an individual participant data meta-analysis of national tuberculosis prevalence surveys
Hamada, Y., Quartagno, M., Law, I., Malik, F., Bonsu, F. A., Adetifa, I. M. O., Adusi-Poku, Y., D'Alessandro, U., Bashorun, A. O., Begum, V., Lolong, D. B., Boldoo, T., Dlamini, T., Donkor, S., Dwihardiani, B., Egwaga, S., Farid, M. N., Anna, A. M., Mae G Gaviola, D., Husain, M. M., & 47 others , Sept 2023, In: EClinicalMedicine. 63, 102191.Research output: Contribution to journal › Article › peer-review
Open Access -
Association of Mortality and Risk of Epilepsy with Type of Acute Symptomatic Seizure after Ischemic Stroke and an Updated Prognostic Model
Sinka, L., Abraira, L., Imbach, L. L., Zieglgänsberger, D., Santamarina, E., Álvarez-Sabín, J., Ferreira-Atuesta, C., Katan, M., Scherrer, N., Bicciato, G., Terziev, R., Simmen, C., Schubert, K. M., Elshahabi, A., Baumann, C. R., Döhler, N., Erdélyi-Canavese, B., Felbecker, A., Siebel, P., Winklehner, M., & 24 others , 12 Jun 2023, In: JAMA Neurology. 80, 6, p. 605-613 9 p.Research output: Contribution to journal › Article › peer-review
8 Citations (Scopus) -
Association of Spike-Specific T Cells with Relative Protection from Subsequent SARS-CoV-2 Omicron Infection in Young Children
Dowell, A. C., Ireland, G., Zuo, J., Moss, P. & Ladhani, S., 3 Jan 2023, In: JAMA Pediatrics. 177, 1, p. 96-97 2 p.Research output: Contribution to journal › Letter › peer-review
Open AccessFile3 Citations (Scopus)4 Downloads (Pure) -
A standardised protocol for relative SARS-CoV-2 variant severity assessment, applied to Omicron BA.1 and Delta in six European countries, October 2021 to February 2022
Nyberg, T., Bager, P., Svalgaard, I. B., Bejko, D., Bundle, N., Evans, J., Krause, T. G., McMenamin, J., Mossong, J., Mutch, H., Omokanye, A., Peralta-Santos, A., Pinto-Leite, P., Starrfelt, J., Thelwall, S., Veneti, L., Whittaker, R., Wood, J., Pebody, R. & Presanis, A. M., 7 Sept 2023, In: Eurosurveillance. 28, 36Research output: Contribution to journal › Article › peer-review
Open Access -
Asymptomatic immunodeficiency-associated vaccine-derived poliovirus infections in two UK children
Singanayagam, A., Klapsa, D., Burton-Fanning, S., Hand, J., Wilton, T., Stephens, L., Mate, R., Shillitoe, B., Celma, C., Slatter, M., Flood, T., Gopal, R., Martin, J. & Zambon, M., Dec 2023, In: Nature Communications. 14, 1, 3413.Research output: Contribution to journal › Article › peer-review
Open Access -
Asymptomatic SARS-CoV-2 Infection by Age: A Global Systematic Review and Meta-analysis
Wang, B., Andraweera, P., Elliott, S., Mohammed, H., Lassi, Z., Twigger, A., Borgas, C., Gunasekera, S., Ladhani, S. & Marshall, H. S., 1 Mar 2023, In: Pediatric Infectious Disease Journal. 42, 3, p. 232-239 8 p.Research output: Contribution to journal › Article › peer-review
Open Access11 Citations (Scopus) -
A systematic review of communication interventions for countering vaccine misinformation
Whitehead, H. S., French, C. E., Caldwell, D. M., Letley, L. & Mounier-Jack, S., 27 Jan 2023, In: Vaccine. 41, 5, p. 1018-1034 17 p.Research output: Contribution to journal › Review article › peer-review
Open AccessFile15 Citations (Scopus)45 Downloads (Pure) -
A Systematic Review of the Prevalence of Persistent Gastrointestinal Symptoms and Incidence of New Gastrointestinal Illness after Acute SARS-CoV-2 Infection
Hawkings, M. J., Vaselli, N. M., Charalampopoulos, D., Brierley, L., Elliot, A. J., Buchan, I. & Hungerford, D., Aug 2023, In: Viruses. 15, 8, 1625.Research output: Contribution to journal › Review article › peer-review
Open Access -
A systematic review of the use of mobile alerting to inform the public about emergencies and the factors that influence the public response
Mowbray, F., Mills, F., Symons, C., Amlôt, R. & James Rubin, G., 2023, (Accepted/In press) In: Journal of Contingencies and Crisis Management.Research output: Contribution to journal › Article › peer-review
Open Access -
A systematic review on the excess health risk of antibiotic-resistant bloodstream infections for six key pathogens in Europe
PrIMAVeRa Workpackage 1, 2023, (Accepted/In press) In: Clinical Microbiology and Infection.Research output: Contribution to journal › Review article › peer-review
Open Access -
A Systematic Review on the Safety of Mycobacterium tuberculosis-Specific Antigen-Based Skin Tests for Tuberculosis Infection Compared With Tuberculin Skin Tests
Hamada, Y., Kontsevaya, I., Surkova, E., Wang, T. T., Wan-Hsin, L., Matveev, A., Ziganshina, L. E., Denkinger, C. M., Korobitsyn, A., Ismail, N., Abubakar, I. & Rangaka, M. X., 1 May 2023, In: Open Forum Infectious Diseases. 10, 5, ofad228.Research output: Contribution to journal › Review article › peer-review
Open Access2 Citations (Scopus) -
A trans disciplinary and multi actor approach to develop high impact food safety messages to consumers: Time for a revision of the WHO - Five keys to safer food?
Langsrud, S., Veflen, N., Allison, R., Crawford, B., Izsó, T., Kasza, G., Lecky, D., Nicolau, A. I., Scholderer, J., Skuland, S. E. & Teixeira, P., Mar 2023, In: Trends in Food Science and Technology. 133, p. 87-98 12 p.Research output: Contribution to journal › Comment/debate
3 Citations (Scopus)